Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella

Marcus Nguyen; S. Wesley Long; Patrick F. McDermott; Randall J. Olsen; Robert Olson; Rick L. Stevens; Gregory H. Tyson; Shaohua Zhao; James J. Davisa

doi:10.1128/JCM.01260-18

Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella

Marcus Nguyen
, S. Wesley Long
, Patrick F. McDermott
, Randall J. Olsen
, Robert Olson
, Rick L. Stevens
, Gregory H. Tyson
, Shaohua Zhao
, James J. Davisa

Office of Graduate Studies and Research

Research output: Contribution to journal › Article › peer-review

Original language	English
Article number	e01260
Journal	Journal of Clinical Microbiology
Volume	57
Issue number	2
DOIs	https://doi.org/10.1128/JCM.01260-18
State	Published - Feb 2019

ASJC Scopus Subject Areas

Microbiology (medical)

Keywords

Antimicrobial susceptibility testing
Deep learning
Diagnostics
Genome sequencing
Machine learning

Access to Document

10.1128/JCM.01260-18

Cite this

@article{9c88f56ed7024d2681e78b999562126b,

title = "Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella",

keywords = "Antimicrobial susceptibility testing, Deep learning, Diagnostics, Genome sequencing, Machine learning",

author = "Marcus Nguyen and \{Wesley Long\}, S. and McDermott, \{Patrick F.\} and Olsen, \{Randall J.\} and Robert Olson and Stevens, \{Rick L.\} and Tyson, \{Gregory H.\} and Shaohua Zhao and Davisa, \{James J.\}",

year = "2019",

month = feb,

doi = "10.1128/JCM.01260-18",

language = "English",

volume = "57",

journal = "Journal of Clinical Microbiology",

issn = "0095-1137",

number = "2",

}

TY - JOUR

T1 - Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella

AU - Nguyen, Marcus

AU - Wesley Long, S.

AU - McDermott, Patrick F.

AU - Olsen, Randall J.

AU - Olson, Robert

AU - Stevens, Rick L.

AU - Tyson, Gregory H.

AU - Zhao, Shaohua

AU - Davisa, James J.

PY - 2019/2

Y1 - 2019/2

KW - Antimicrobial susceptibility testing

KW - Deep learning

KW - Diagnostics

KW - Genome sequencing

KW - Machine learning

UR - https://www.scopus.com/pages/publications/85060910772

UR - https://www.scopus.com/pages/publications/85060910772#tab=citedBy

U2 - 10.1128/JCM.01260-18

DO - 10.1128/JCM.01260-18

M3 - Article

C2 - 30333126

AN - SCOPUS:85060910772

SN - 0095-1137

VL - 57

JO - Journal of Clinical Microbiology

JF - Journal of Clinical Microbiology

IS - 2

M1 - e01260

ER -

Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella

ASJC Scopus Subject Areas

Keywords

Access to Document

Other files and links

Cite this